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DTSTART;TZID=America/Los_Angeles:20141203T120000
DTEND;TZID=America/Los_Angeles:20141203T130000
DTSTAMP:20260507T025438
CREATED:20140807T080101Z
LAST-MODIFIED:20200911T202637Z
UID:8382-1417608000-1417611600@citris-uc.org
SUMMARY:Big Data for Better Medicine\, Dec 3
DESCRIPTION:UCSC has built the Cancer Genomics Hub (CGHub) for the US National Cancer Institute\, designed to hold data for all major NCI projects. To date it has served more than more than 15 petabytes of data to the research committee. Cancer is exceedingly complex\, with thousands of subtypes involving an immense number of different combinations of mutations. The only way we will understand it is to gather together DNA data from many thousands of cancer genomes so that we have the statistical power to distinguish between recurring combinations of mutations that drive cancer progression and “passenger” mutations that occur by random chance. Currently\, with the exception of a few international research projects\, most cancer genomics research is taking place in research silos\, with little opportunity for data sharing. If this trend continues\, we lose an incredible opportunity. \nSoon cancer genome sequencing will be widespread in clinical practice\, making it possible in principle to study as many as a million cancer genomes.  For these data to also have impact on understanding cancer\, we must begin soon to move data into a network of compatible global cloud storage and computing systems\, and design mechanisms that allow genome and clinical data to be used in research with appropriate patient consent. The Global Alliance for Genomics and Health was created to address this problem. Our Data Working Group is designing the future of large-scale genomics for cancer and other diseases. This is an opportunity we cannot turn away from. \nReference: http://www.eecs.berkeley.edu/Pubs/TechRpts/2012/EECS-2012-211.html \nBiography:\nDavid Haussler develops new statistical and algorithmic methods to explore the molecular function\, evolution\, and disease process in the human genome\, integrating comparative and high-throughput genomics data to study gene structure\, function\, and regulation. He is credited with pioneering the use in genomics of hidden Markov models (HMMs)\, stochastic context-free grammars\, and discriminative kernel methods. As a collaborator on the international Human Genome Project\, his team posted the first publicly available computational assembly of the human genome sequence on the Internet on July 7\, 2000. His team subsequently developed the UCSC Genome Browser\, a web-based tool that is used extensively in biomedical research and serves\, along with the European Ensembl platform\, virtually all large-scale vertebrate genomics projects\, including NHGRI’s ENCODE project\, the 1000 Genomes Project\, and NCI’s TCGA. As the first designated Trusted Partner of the NIH\, he built the CGHub database to hold NCI’s cancer genome data and is a co-founder and organizing member of the Global Alliance for Genomics and Health (GA4GH)\, a coalition of the top research\, health care\, and disease advocacy organizations that have taken the first steps to standardize and enable secure sharing of genomic and clinical data. \n——————— \nLive broadcast at  http://video.citris.berkeley.edu/playlists/webcast. Ask questions live on Twitter: #CITRISRE. All talks may be viewed on our YouTube channel \nThe schedule for the semester can be found on the CITRIS site.  \nWebviewing:\nUC Davis: 1065 Kemper Hall\nUC Merced: COB 322- Willow\nUC Santa Cruz: SOE E2 Building\, Room 595B \nRegistration through eventbrite is required for lunch at UC Berkley:\nhttps://david-haussler-citrisre.eventbrite.com
URL:https://citris-uc.org/event/big-data-for-better-medicine-dec-3/
LOCATION:Banatao Auditorium\, Sutardja Dai Hall\, Room 310\, Berkeley\, 94720
CATEGORIES:CITRIS Research Exchange Seminar
ATTACH;FMTTYPE=image/jpeg:https://citris-uc.org/wp-content/uploads/2014/08/RE-2014-Fall-Featured-Image-scaled.jpg
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DTSTART;TZID=America/Los_Angeles:20141203T160000
DTEND;TZID=America/Los_Angeles:20141203T170000
DTSTAMP:20260507T025438
CREATED:20141202T090101Z
LAST-MODIFIED:20141202T090101Z
UID:9035-1417622400-1417626000@citris-uc.org
SUMMARY:Software-Defined Networks and the Maturing of the Internet
DESCRIPTION:The genius of the pioneers of the Internet was to keep the network of links and routers – the “plumbing” – dumb and minimal\, placing as much of the intelligence as possible in the computers at the edge. Our computers at the edges could be upgraded over time to add new features – such as congestion control and security – without having to change the network. A streamlined network could…
URL:https://citris-uc.org/event/software-defined-networks-and-the-maturing-of-the-internet/
LOCATION:CA
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DTSTART;TZID=America/Los_Angeles:20141204T180000
DTEND;TZID=America/Los_Angeles:20141204T200000
DTSTAMP:20260507T025438
CREATED:20141202T090101Z
LAST-MODIFIED:20141202T090101Z
UID:9036-1417716000-1417723200@citris-uc.org
SUMMARY:Movers and Makers
DESCRIPTION:A Panel of Local Innovators
URL:https://citris-uc.org/event/movers-and-makers/
LOCATION:CA
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BEGIN:VEVENT
DTSTART;TZID=America/Los_Angeles:20141204T190000
DTEND;TZID=America/Los_Angeles:20141204T200000
DTSTAMP:20260507T025438
CREATED:20141202T090101Z
LAST-MODIFIED:20230512T154111Z
UID:9037-1417719600-1417723200@citris-uc.org
SUMMARY:High Tech\, Low Life (Stephen T. Maing; China/US\, 2012)
DESCRIPTION:With special guest Monica Lam. High Tech\, Low Life follows two of China’s first “citizen reporters” as they roam the country reporting on social and economic debacles that have been suppressed by official outlets. (87 mins)
URL:https://citris-uc.org/event/high-tech-low-life-stephen-t-maing-chinaus-2012/
LOCATION:CA
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DTSTART;TZID=America/Los_Angeles:20141211T140000
DTEND;TZID=America/Los_Angeles:20141211T170000
DTSTAMP:20260507T025438
CREATED:20141120T004938Z
LAST-MODIFIED:20250617T232650Z
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SUMMARY:Count Me In: Walking and the City
DESCRIPTION:An afternoon discussion and poster session \nPresented by students\, faculty and staff from the Global Urban Humanities program\, CITRIS\, BCNM\, and the CITRIS Social Apps Lab \nDuring Fall 2014\, a team of 23 graduate students and two professors worked with the city of San Leandro to develop digital tools to improve the way city residents live\, work\, and play together. At this event\, city officials and industry leaders will present the challenges of planning for and encouraging urban mobility\, and the teams will discuss their field research and present designs that respond to these concerns through urban renewal projects. Core topics include pedestrian safety\, urban beauty\, and public transit optimization. The teams’ projects showcase how sensor data can facilitate existing city initiatives\, articulate urban challenges\, and validate the impact of urban renewal designs. Special guests include Bay Area business leaders\, innovation officers\, design agencies\, and community organizations who will present feedback to the research teams in this public discussion. \nPartners include: Kaiser Permanente\, San Francisco Office of Innovation\, City of San Leandro
URL:https://citris-uc.org/event/count-walking-city/
LOCATION:Banatao Auditorium\, Sutardja Dai Hall\, Room 310\, Berkeley\, 94720
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